Literature

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== Systems Biology ==
 
== Systems Biology ==
*Zoltan Szallasi, Jörg Stelling, Vipul Periwal - System Modeling in Cellular Biology [http://books.google.at/books?id=O9sBQgAACAAJ&dq=Systems+modeling+in+cellular+biology&hl=de&sa=X&ei=IQ3JUJzXIMKItQbqhYHYDQ&ved=0CDEQ6AEwAA]
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*Uri Alon - An Introduction to Systems Biology: Design Principles of Biological Circuits   [http://amzn.to/2X4LdIW (Link)]
*Uri Alon - An Introduction to Systems Biology: Design Principles of Biological Circuits[http://www.amazon.de/Introduction-Systems-Biology-Mathematical-Computational/dp/1584886420/ref=sr_1_1?ie=UTF8&qid=1355348281&sr=8-1]
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*Bernhard Ø. Palsson - Systems Biology: Simulation of Dynamic Network States[http://books.google.at/books?id=v1p7FuF6DuAC&printsec=frontcover&dq=Bernhard+%C3%98.+Palsson+-+Systems+Biology:+Simulation+of+Dynamic+Network+States&hl=de&sa=X&ei=WwXJUPyUGsj4sgb184HgCw&ved=0CDEQ6AEwAA#v=onepage&q=Bernhard%20%C3%98.%20Palsson%20-%20Systems%20Biology%3A%20Simulation%20of%20Dynamic%20Network%20States&f=false]
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*Zoltan Szallasi, Jörg Stelling, Vipul Periwal - System Modeling in Cellular Biology   [http://amzn.to/30TjJa1 (Link)]
*Bernhard Ø. Palsson - Systems Biology: Properties of Reconstructed Networks [http://books.google.nl/books?id=Q-EvI9j0B7YC&printsec=frontcover&hl=de&source=gbs_ge_summary_r&cad=0#v=onepage&q&f=false]
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*Edda Klipp ''et al''.- Systems Biology: A Textbook [http://books.google.at/books?id=V1ZiEw5eo7EC&printsec=frontcover&dq=Edda+Klipp+Systems+Biology:+A+Textbook&hl=de&sa=X&ei=OgXJUPDvMMzAtAa6qoHgAw&ved=0CDQQ6AEwAA]
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*Bernhard Ø. Palsson - Systems Biology: Simulation of Dynamic Network States   [http://amzn.to/3hKQI7c (Link)]
*Michael A. Savageau - Biochemical Systems Analysis: A Study of Function and Design in Molecular Biology  
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*Philip W. Kuchel $\&$ Peter J. Mulquiney - Modelling Metabolism with Mathematica: Analysis of Human Erythrocyte[http://books.google.at/books?id=ILEpWpKvbM8C&dq=Modelling+Metabolism+with+Mathematica:+Analysis+of+Human+Erythrocyte&hl=de&sa=X&ei=8ATJUJ30DYzJswb46YDYAg&ved=0CDQQ6AEwAA]
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*Bernhard Ø. Palsson - Systems Biology: Properties of Reconstructed Networks [http://amzn.to/2CZ8tRF (Link)]
*Robert Rosen - Dynamical System Theory in Biology [http://www.amazon.com/Dynamical-System-Theory-Biology-Vol/dp/0471735507]
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*Albert Goldbeter - Biochemical Oscillations and Cellular Rhythems: The molecular bases of periodic and chaotic behaviour
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*Michael A. Savageau - Biochemical Systems Analysis: A Study of Function and Design in Molecular Biology [http://amzn.to/2DfUiY0 (Link)]
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*Philip W. Kuchel $\&$ Peter J. Mulquiney - Modelling Metabolism with Mathematica: Analysis of Human Erythrocyte   [http://amzn.to/39xGg08 (Link)]
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*Robert Rosen - Dynamical System Theory in Biology [http://amzn.to/331rf5k (Link)]
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*Albert Goldbeter - Biochemical Oscillations and Cellular Rhythems: The molecular bases of periodic and chaotic behaviour [http://amzn.to/30WqasR (Link)]
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*Eduardo Sonntag - Mathematical Systems Biology [[Media:Mathematical Systems Biology.pdf|Lecture Notes]]
 
*Eduardo Sonntag - Mathematical Systems Biology [[Media:Mathematical Systems Biology.pdf|Lecture Notes]]
*Gregory N. Stephanopoulos $\&$ Aristos A. Aristidou - Metabolic Engineering [http://books.google.nl/books?id=9mGzkso4NVQC&pg=PR3&dq=Gregory+N.+Stephanopoulos+and+Aristos+A.+Aristidou+-+Metabolic+Engineering&hl=de&sa=X&ei=mctTUuCeMoub0AXu9oC4CQ&ved=0CDIQ6AEwAA#v=onepage&q=Gregory%20N.%20Stephanopoulos%20and%20Aristos%20A.%20Aristidou%20-%20Metabolic%20Engineering&f=false]
 
  
== Biological Physics - Chemical Physics ==
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*Gregory N. Stephanopoulos $\&$ Aristos A. Aristidou - Metabolic Engineering [http://amzn.to/3jKzj0m (Link)]
*Rob Phillips - Physical Biology of the Cell [http://www.amazon.de/Physical-Biology-Cell-ebook/dp/B008ZJKLGQ/ref=sr_1_fkmr0_3?s=books-intl-de&ie=UTF8&qid=1355348431&sr=1-3-fkmr0]
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*Nicolis $\&$ Prigogine - Self-Organization in Nonequilibrium Systems: From Dissipative Structures to Order through Fluctuations
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*Hans V. Westerhoff $\&$ Karel Van Dam - Thermodynamics and control of biological free-engergy transduction
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*Martin Feinberg - Feinberg Lectures on Chemical Reaction Networks[http://crnt.engineering.osu.edu/LecturesOnReactionNetworks]
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*Donald T. Haynie - Biological Thermodynamics
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== Biological Physics - Chemical Physics ==
 +
*Rob Phillips - Physical Biology of the Cell [http://amzn.to/30Ycv4v (Link)]
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*Nicolis $\&$ Prigogine - Self-Organization in Nonequilibrium Systems: From Dissipative Structures to Order through Fluctuations [http://amzn.to/3jQd4Gv (Link)]
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*Hans V. Westerhoff $\&$ Karel Van Dam - Thermodynamics and control of biological free-engergy transduction [http://amzn.to/305j0mY (Link)]
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*Martin Feinberg - Feinberg Lectures on Chemical Reaction Networks [http://crnt.engineering.osu.edu/LecturesOnReactionNetworks Feinberg Lectures]
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*Donald T. Haynie - Biological Thermodynamics  [http://amzn.to/2EsL9fw (Link)]
  
 
== Complex Systems ==
 
== Complex Systems ==
*Albert-Laszlo Barabasi - Network Science [http://barabasilab.neu.edu/networksciencebook/downlPDF.html]
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*Albert-Laszlo Barabasi - Network Science [http://barabasilab.neu.edu/networksciencebook/downlPDF.html]  
*Mark Newman - The Structure and Dynamics of Networks
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*Albert-Laszlo Barabasi - Networks [http://amzn.to/332zNc9 (Link)] 
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*Mark Newman - The Structure and Dynamics of Networks [http://amzn.to/30SBFSl (Link)]
  
 
== Physics ==
 
== Physics ==
*Frederik Reif - Statistische Physik und Theorie der Wärme [http://books.google.at/books?id=0aTs3bpc_lwC&printsec=frontcover&dq=frederik+reif+statistische&hl=de&sa=X&ei=wwTJUL_2L8TXsgaWlICIDw&ved=0CDMQ6AEwAA]
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*Frederik Reif - Statistische Physik und Theorie der Wärme [http://www.amazon.co.uk/Statistische-Physik-Theorie-W%C3%A4rme-Frederick/dp/311011383X/ref=sr_1_1?dchild=1&keywords=Statistische+Physik+und+Theorie+der+W%C3%A4rme&qid=1595964142&s=books&sr=1-1 (Link)]
*Wolfgang Gopel - Statistische Thermodynamik [http://books.google.at/books/about/Statistische_Thermodynamik.html?id=xHpwAAAACAAJ&redir_esc=y]
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*Wolfgang Gopel - Statistische Thermodynamik [http://amzn.to/32ZBLKx (Link)]
  
 
== Mathematics ==
 
== Mathematics ==
*Riley, Hobson and Bence - Mathematical Methods for Physics and Engineering
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*Riley, Hobson and Bence - Mathematical Methods for Physics and Engineering [http://amzn.to/308goVs (Link)]
*D.W Jordan and P. Smith - Nonlinear Ordinary Differential Equations: An Introduction for Scientists and Engineers
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**Excellent book with solved exercises available [http://amzn.to/2CViY8w (Link)]
*Steven H. Strogatz - Nonlinear Dynamics and Chaos: With Applications to Physics, Biology, Chemistry and Engineering [http://www.amazon.de/Nonlinear-Dynamics-Chaos-Applications-Nonlinearity/dp/0738204536/ref=sr_1_2?ie=UTF8&qid=1355348570&sr=8-2]
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*D.W Jordan and P. Smith - Nonlinear Ordinary Differential Equations: An Introduction for Scientists and Engineers [http://amzn.to/3hHa0dK (Link)]
*Courant Hilbert- Methods Of Mathematical Physics Vol. 1 and 2
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**exercises with solutions [http://amzn.to/30SDWwR (Link)]
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*Steven H. Strogatz - Nonlinear Dynamics and Chaos: With Applications to Physics, Biology, Chemistry and Engineering [http://amzn.to/2P4Dwhu (Link)] Recommended Classic
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*Courant Hilbert- Methods Of Mathematical Physics [http://amzn.to/39zzI0Y (Vol1)] [http://amzn.to/2P58HJq (Vol2)]
  
 
== Control Systems ==
 
== Control Systems ==
*Katsuhiko Ogata - Modern Control Engineering
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*Katsuhiko Ogata - Modern Control Engineering [http://amzn.to/3jPMGMU (Link)]
 
*Karl Johan Aström and Richard M. Murray - [[Media:Caltech_-_control_systems_script_22Feb09.pdf|Feedback Systems: An Introduction for Scientists and Engineers]] (Caltech)
 
*Karl Johan Aström and Richard M. Murray - [[Media:Caltech_-_control_systems_script_22Feb09.pdf|Feedback Systems: An Introduction for Scientists and Engineers]] (Caltech)
*John H. Milsum - Biological Control Systems Analysis
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*John H. Milsum - Biological Control Systems Analysis [http://amzn.to/3jReD6K (Link)]
  
 
== Statistics ==
 
== Statistics ==
*P. McCullagh and J.A. Nelder - Generalized Linear Models (second edition)
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*P. McCullagh and J.A. Nelder - Generalized Linear Models (second edition) [http://amzn.to/30ZrECI (Link)]
*Raymond H. Myers, Douglas C. Montgomery, G. Geoffry Vining - Generalized Linear Models: With Applications in Engineering and the Sciences
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*Raymond H. Myers, Douglas C. Montgomery, G. Geoffry Vining - Generalized Linear Models: With Applications in Engineering and the Sciences [http://amzn.to/2P0J3FJ (Link)]

Revision as of 21:38, 28 July 2020

Contents

Systems Biology

  • Uri Alon - An Introduction to Systems Biology: Design Principles of Biological Circuits (Link)
  • Zoltan Szallasi, Jörg Stelling, Vipul Periwal - System Modeling in Cellular Biology (Link)
  • Bernhard Ø. Palsson - Systems Biology: Simulation of Dynamic Network States (Link)
  • Bernhard Ø. Palsson - Systems Biology: Properties of Reconstructed Networks (Link)
  • Michael A. Savageau - Biochemical Systems Analysis: A Study of Function and Design in Molecular Biology (Link)
  • Philip W. Kuchel $\&$ Peter J. Mulquiney - Modelling Metabolism with Mathematica: Analysis of Human Erythrocyte (Link)
  • Robert Rosen - Dynamical System Theory in Biology (Link)
  • Albert Goldbeter - Biochemical Oscillations and Cellular Rhythems: The molecular bases of periodic and chaotic behaviour (Link)
  • Gregory N. Stephanopoulos $\&$ Aristos A. Aristidou - Metabolic Engineering (Link)

Biological Physics - Chemical Physics

  • Rob Phillips - Physical Biology of the Cell (Link)
  • Nicolis $\&$ Prigogine - Self-Organization in Nonequilibrium Systems: From Dissipative Structures to Order through Fluctuations (Link)
  • Hans V. Westerhoff $\&$ Karel Van Dam - Thermodynamics and control of biological free-engergy transduction (Link)
  • Martin Feinberg - Feinberg Lectures on Chemical Reaction Networks Feinberg Lectures
  • Donald T. Haynie - Biological Thermodynamics (Link)

Complex Systems

  • Albert-Laszlo Barabasi - Network Science [1]
  • Albert-Laszlo Barabasi - Networks (Link)
  • Mark Newman - The Structure and Dynamics of Networks (Link)

Physics

  • Frederik Reif - Statistische Physik und Theorie der Wärme (Link)
  • Wolfgang Gopel - Statistische Thermodynamik (Link)

Mathematics

  • Riley, Hobson and Bence - Mathematical Methods for Physics and Engineering (Link)
    • Excellent book with solved exercises available (Link)
  • D.W Jordan and P. Smith - Nonlinear Ordinary Differential Equations: An Introduction for Scientists and Engineers (Link)
    • exercises with solutions (Link)
  • Steven H. Strogatz - Nonlinear Dynamics and Chaos: With Applications to Physics, Biology, Chemistry and Engineering (Link) Recommended Classic
  • Courant Hilbert- Methods Of Mathematical Physics (Vol1) (Vol2)

Control Systems

Statistics

  • P. McCullagh and J.A. Nelder - Generalized Linear Models (second edition) (Link)
  • Raymond H. Myers, Douglas C. Montgomery, G. Geoffry Vining - Generalized Linear Models: With Applications in Engineering and the Sciences (Link)