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Systems Biology

  • Uri Alon - An Introduction to Systems Biology: Design Principles of Biological Circuits (Link)
  • Edda Klipp - Systems Biology (Link)
  • Zoltan Szallasi, Jörg Stelling, Vipul Periwal - System Modeling in Cellular Biology (Link)
  • Bernhard Ø. Palsson - Systems Biology: Simulation of Dynamic Network States (Link)
  • Bernhard Ø. Palsson - Systems Biology: Properties of Reconstructed Networks (Link)
  • Michael A. Savageau - Biochemical Systems Analysis: A Study of Function and Design in Molecular Biology (Link)
  • Philip W. Kuchel $\&$ Peter J. Mulquiney - Modelling Metabolism with Mathematica: Analysis of Human Erythrocyte (Link)
  • Robert Rosen - Dynamical System Theory in Biology (Link)
  • Albert Goldbeter - Biochemical Oscillations and Cellular Rhythems: The molecular bases of periodic and chaotic behaviour (Link)
  • Gregory N. Stephanopoulos $\&$ Aristos A. Aristidou - Metabolic Engineering (Link)

Biological Physics - Chemical Physics

  • Rob Phillips - Physical Biology of the Cell (Link)
  • Nicolis $\&$ Prigogine - Self-Organization in Nonequilibrium Systems: From Dissipative Structures to Order through Fluctuations (Link)
  • Hans V. Westerhoff $\&$ Karel Van Dam - Thermodynamics and control of biological free-engergy transduction (Link)
  • Martin Feinberg - Feinberg Lectures on Chemical Reaction Networks Feinberg Lectures
  • Donald T. Haynie - Biological Thermodynamics (Link)

Complex Systems

  • Albert-Laszlo Barabasi - Network Science [1]
  • Albert-Laszlo Barabasi - Networks (Link)
  • Mark Newman - The Structure and Dynamics of Networks (Link)


  • D. Griffiths - Introduction to Quantum Mechanics (Link)
  • Frederik Reif - Statistische Physik und Theorie der Wärme (Link)
  • Wolfgang Gopel - Statistische Thermodynamik (Link)


  • Riley, Hobson and Bence - Mathematical Methods for Physics and Engineering (Link)
    • Excellent book with solved exercises available (Link)
  • D.W Jordan and P. Smith - Nonlinear Ordinary Differential Equations: An Introduction for Scientists and Engineers (Link)
    • exercises with solutions (Link)
  • Steven H. Strogatz - Nonlinear Dynamics and Chaos: With Applications to Physics, Biology, Chemistry and Engineering (Link) Recommended Classic
  • Courant Hilbert- Methods Of Mathematical Physics (Vol1) (Vol2)

Control Systems


  • P. McCullagh and J.A. Nelder - Generalized Linear Models (second edition) (Link)
  • Raymond H. Myers, Douglas C. Montgomery, G. Geoffry Vining - Generalized Linear Models: With Applications in Engineering and the Sciences (Link)